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  5. Lfl_g07382

Lfl_g07382


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07382

Target Alias Description ECC score Gene Family Method Actions
Aev_g42379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G053200.1 Ceric.07G053200 not classified & original description: pacid=50626825... 0.04 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.02 OrthoFinder output from all 47 species
Dde_g13282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33439 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Lfl_g05691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015411 No alias not classified & original description: CDS=1-3726 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0198.g025550 No alias not classified & original description: CDS=1-2784 0.02 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g076700.1.1 Solyc02g076700 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc03g114010.3.1 Solyc03g114010 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.03 OrthoFinder output from all 47 species
Solyc06g064600.1.1 Solyc06g064600 Pentatricopeptide repeat-containing protein At1g56690,... 0.02 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
Solyc11g067210.1.1 Solyc11g067210 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 419 466
IPR002885 Pentatricopeptide_repeat 520 566
IPR002885 Pentatricopeptide_repeat 317 364
IPR002885 Pentatricopeptide_repeat 215 262
IPR002885 Pentatricopeptide_repeat 724 771
IPR002885 Pentatricopeptide_repeat 621 668
IPR002885 Pentatricopeptide_repeat 800 822
IPR002885 Pentatricopeptide_repeat 596 618
IPR002885 Pentatricopeptide_repeat 698 719
IPR002885 Pentatricopeptide_repeat 493 517
No external refs found!