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  5. Lfl_g07400

Lfl_g07400


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07400

Target Alias Description ECC score Gene Family Method Actions
Adi_g025688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099164 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36514 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19301 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g62402 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene18986.t1 MEF21, Aspi01Gene18986 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0389.g067649 OTP84 not classified & original description: CDS=1-2388 0.02 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67470 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.02 OrthoFinder output from all 47 species
Ceric.28G015100.1 Ceric.28G015100 not classified & original description: pacid=50570923... 0.02 OrthoFinder output from all 47 species
Dac_g14062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40966 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48675 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02375 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07081 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07421 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25543 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33317 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_175623g0010 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.02 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g13692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12602 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57069 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61681 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16161 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022201 No alias not classified & original description: CDS=265-2808 0.02 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18985 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036537_P001 Zm00001e036537 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 529 572
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 428 474
IPR002885 Pentatricopeptide_repeat 326 373
IPR002885 Pentatricopeptide_repeat 655 711
IPR002885 Pentatricopeptide_repeat 604 627
IPR002885 Pentatricopeptide_repeat 128 154
IPR002885 Pentatricopeptide_repeat 402 425
IPR002885 Pentatricopeptide_repeat 504 527
No external refs found!