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  5. Lfl_g07409

Lfl_g07409


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07409

Target Alias Description ECC score Gene Family Method Actions
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G68930 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 OrthoFinder output from all 47 species
AT2G34400 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G16835 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G19191 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004459 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034320 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075582 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087501 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21991 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06555 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07500 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19051 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19283 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10753 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27035 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0061.g034904 No alias not classified & original description: CDS=1-1944 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048709 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2400 0.03 OrthoFinder output from all 47 species
Cba_g04064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14131 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19898 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20235 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27798 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30018 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76301 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g76849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77837 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G006100.1 Ceric.14G006100 not classified & original description: pacid=50634395... 0.03 OrthoFinder output from all 47 species
Ceric.28G052000.1 OTP86, Ceric.28G052000 not classified & original description: pacid=50569960... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.200 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g06823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12454 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18152 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g24515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28766 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33321 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08759 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02806 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21844 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51155 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31027 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01010031001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Gb_38938 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08120.1 OTP81, LOC_Os01g08120 RNA editing factor (OTP81) 0.02 OrthoFinder output from all 47 species
LOC_Os01g46230.1 MEF1, LOC_Os01g46230 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g05143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05435 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33495 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_20782g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Msp_g17466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27639 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01804 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41304 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03497 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35988 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.02 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01489 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07560 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 77 118
IPR002885 Pentatricopeptide_repeat 465 511
IPR002885 Pentatricopeptide_repeat 173 218
IPR002885 Pentatricopeptide_repeat 566 613
IPR002885 Pentatricopeptide_repeat 248 271
IPR002885 Pentatricopeptide_repeat 276 304
IPR002885 Pentatricopeptide_repeat 147 170
IPR002885 Pentatricopeptide_repeat 540 562
IPR002885 Pentatricopeptide_repeat 349 375
No external refs found!