1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g08093

Lfl_g08093


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g08093

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00097640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.01 OrthoFinder output from all 47 species
Adi_g036772 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g042910 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110647 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16783 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29210 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28159 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14074.t1 CRR22, Aspi01Gene14074 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27883.t1 Aspi01Gene27883 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28168.t1 Aspi01Gene28168 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31776.t1 Aspi01Gene31776 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038640 OTP86 not classified & original description: CDS=63-2522 0.02 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.02 OrthoFinder output from all 47 species
Azfi_s1395.g102559 No alias not classified & original description: CDS=1-912 0.02 OrthoFinder output from all 47 species
Azfi_s3922.g117339 No alias not classified & original description: CDS=1-831 0.02 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.02 OrthoFinder output from all 47 species
Cba_g05154 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05301 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.02 OrthoFinder output from all 47 species
Dac_g03777 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_36775 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g25860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429958g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_9463538g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06205 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15547 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g40990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56969 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001817 No alias not classified & original description: CDS=1-3483 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020713 No alias not classified & original description: CDS=1-3843 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023175 No alias not classified & original description: CDS=1-2640 0.02 OrthoFinder output from all 47 species
Sam_g29927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo136134 EMB2261 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Smo96927 EMB2758 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Smo99677 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Spa_g08299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 72 102
IPR002885 Pentatricopeptide_repeat 349 373
IPR002885 Pentatricopeptide_repeat 246 267
IPR002885 Pentatricopeptide_repeat 751 778
IPR002885 Pentatricopeptide_repeat 549 574
IPR002885 Pentatricopeptide_repeat 274 304
IPR002885 Pentatricopeptide_repeat 375 403
IPR002885 Pentatricopeptide_repeat 575 621
IPR002885 Pentatricopeptide_repeat 675 717
IPR002885 Pentatricopeptide_repeat 170 217
IPR002885 Pentatricopeptide_repeat 473 520
No external refs found!