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  5. Lfl_g08480

Lfl_g08480 (BAT1)


Aliases : BAT1

Description : gamma-aminobutyric acid transporter *(GABP) & original description: none


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g08480
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Adi_g011899 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aev_g17622 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Ala_g11911 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Als_g24664 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aop_g08356 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aop_g25166 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.05 OrthoFinder output from all 47 species
Aop_g70760 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.05 OrthoFinder output from all 47 species
Dac_g34930 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Dde_g19757 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Dde_g23649 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g22282 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g42234.1 BAT1, LOC_Os01g42234 gamma-aminobutyric acid transporter (GABP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g35540.1 BAT1, LOC_Os04g35540 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
Len_g22396 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
MA_833954g0010 BAT1 Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Msp_g06265 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Msp_g27472 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g40007 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g15240 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g29387 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g25884 No alias gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e020885_P001 Zm00001e020885 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 44 499
No external refs found!