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  5. Aop_g00307

Aop_g00307 (EXPB3, ATEXPB3,...)


Aliases : EXPB3, ATEXPB3, ATHEXP BETA 1.6

Description : not classified & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00307

Target Alias Description ECC score Gene Family Method Actions
AT3G03220 ATEXP13,... expansin A13 0.03 OrthoFinder output from all 47 species
AT3G15370 ATHEXP ALPHA... expansin 12 0.04 OrthoFinder output from all 47 species
Als_g15151 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14225.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g076987 ATEXPA4, ATEXP4,... Expansin-A32 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
GSVIVT01019889001 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
LOC_Os03g31480.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g44290.1 ATHEXP BETA 1.1,... Expansin-B12 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g13532 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37654 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37801 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
MA_12056g0010 ATEXPA1, EXP1,... alpha-class expansin 0.05 OrthoFinder output from all 47 species
Mp2g18610.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g03890.1 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g28211 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g31390 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02838 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g115270.3.1 ATHEXP ALPHA ... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Spa_g21671 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49386 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03794 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25553 ATEXPA10,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g29823 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 171 251
IPR009009 RlpA-like_DPBB 77 159
No external refs found!