Aliases : PUB8, B80
Description : E3 ubiquitin ligase *(PUB8) & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00030110 | PUB15,... | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00006p00267930 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 19 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00007p00217990 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00086p00031680 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT1G10560 | PUB18, ATPUB18 | plant U-box 18 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G58680 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g017517 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04770 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g08869 | PUB15 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03799 | ATPUB17, PUB17 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g16594 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01685 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g17483 | PUB15 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g19238 | ATPUB17, PUB17 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g01345 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01377.t1 | PUB14, ATPUB14,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene36187.t1 | ATPUB17, PUB17,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene43158.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44181.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44182.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44183.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44184.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44185.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44188.t1 | Aspi01Gene44188 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0102.g044585 | ATPUB17, PUB17 | not classified & original description: CDS=188-889 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s2565.g112179 | No alias | not classified & original description: CDS=1-438 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04504 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G010200.1 | Ceric.10G010200 | not classified & original description: pacid=50612946... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G010300.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50611933... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.13G074400.1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G093000.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50635700... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G012900.1 | Ceric.26G012900 | not classified & original description: pacid=50598948... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.34G042900.1 | PUB13, ATPUB13,... | not classified & original description: pacid=50623547... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08066 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g12067 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g12068 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g15895 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02285 | ATPUB17, PUB17 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02771 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02800 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04978 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06164 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06975 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g11164 | PUB12, AtPUB12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22153 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g29208 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016225001 | PUB14, ATPUB14 | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020229001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021265001 | ATPUB17, PUB17 | U-box domain-containing protein 17 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01036669001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10627 | PUB8, B80 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_24091 | PUB9, ATPUB9 | U-box domain-containing protein 14 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_29129 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_29276 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g60860.1 | LOC_Os01g60860 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g72600.1 | LOC_Os01g72600 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g32100.1 | LOC_Os03g32100 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g39930.1 | LOC_Os05g39930 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g51130.1 | PUB15, LOC_Os06g51130 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g04470.1 | PUB8, B80, LOC_Os08g04470 | U-box domain-containing protein 8 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g32060.1 | LOC_Os08g32060 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g37570.1 | PUB15, LOC_Os08g37570 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08985 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g16436 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g20959 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_10431467g0020 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.02 | OrthoFinder output from all 47 species | |
| MA_29517g0010 | No alias | U-box domain-containing protein 12 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
| MA_9917294g0010 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g01206 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g16068 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g31758 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g37725 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38088 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g05165 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25617 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28240 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32554 | PUB12, AtPUB12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g35149 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01986 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12553 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003607 | ATPUB17, PUB17 | not classified & original description: CDS=1-2595 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114160.1.1 | Solyc03g114160 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g005670.1.1 | Solyc05g005670 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g056450.4.1 | PUB9, ATPUB9,... | U-box domain-containing protein 9 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g088360.2.1 | Solyc12g088360 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g05552 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11467 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11468 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18762 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g25117 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g01104 | No alias | E3 ubiquiTin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02458 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g10003 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13971 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003398_P001 | PUB15, Zm00001e003398 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018578_P001 | Zm00001e018578 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019429_P001 | Zm00001e019429 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028839_P001 | Zm00001e028839 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e031915_P001 | Zm00001e031915 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034012_P001 | Zm00001e034012 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005199 | structural constituent of cell wall | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0009664 | plant-type cell wall organization | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | HCCA |
| No external refs found! |
