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  4. Sequence
  5. Aop_g00791

Aop_g00791


Description : not classified & original description: none


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00791
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AT2G35540 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
AT3G04960 No alias Domain of unknown function (DUF3444) 0.02 OrthoFinder output from all 47 species
AT3G04980 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g058078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G052600.1 Ceric.08G052600 not classified & original description: pacid=50638471... 0.03 OrthoFinder output from all 47 species
Ceric.13G032100.1 Ceric.13G032100 not classified & original description: pacid=50635670... 0.03 OrthoFinder output from all 47 species
GSVIVT01030061001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g30620.3 LOC_Os02g30620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g28310.1 LOC_Os03g28310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g31940.1 LOC_Os04g31940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g02170.1 LOC_Os06g02170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g34440.1 LOC_Os06g34440 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g04267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g27530.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g20312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011889 No alias not classified & original description: CDS=1-2955 0.03 OrthoFinder output from all 47 species
Sam_g11856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g098250.4.1 Solyc01g098250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g019640.1.1 Solyc03g019640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g047690.1.1 Solyc07g047690 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g06089 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017660_P001 Zm00001e017660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025632_P001 Zm00001e025632 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025633_P001 Zm00001e025633 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040755_P001 Zm00001e040755 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041002_P001 Zm00001e041002 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 67 128
IPR024593 DUF3444 562 765
No external refs found!