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  5. Aop_g00855

Aop_g00855 (RPL16)


Aliases : RPL16

Description : component *(uL16m) of large mitoribosomal-subunit proteome & original description: none


Gene families : OG0004825 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004825_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00855
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02809p00000680 evm_27.TU.AmTr_v1... 50S ribosomal protein L16, chloroplastic OS=Amborella trichopoda 0.07 OrthoFinder output from all 47 species
ATCG00790 RPL16 ribosomal protein L16 0.07 OrthoFinder output from all 47 species
ATMG00080 RPL16 ribosomal protein L16 0.11 OrthoFinder output from all 47 species
Aob_g10973 RPL16 component *(uL16m) of large mitoribosomal-subunit... 0.16 OrthoFinder output from all 47 species
Ceric.05G042300.1 RPL16, Ceric.05G042300 component *(uL16c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Ceric.05G052200.1 RPL16, Ceric.05G052200 not classified & original description: pacid=50577977... 0.11 OrthoFinder output from all 47 species
Ceric.1Z020000.1 RPL16, Ceric.1Z020000 not classified & original description: pacid=50586397... 0.05 OrthoFinder output from all 47 species
Ceric.29G004300.1 RPL16, Ceric.29G004300 not classified & original description: pacid=50624823... 0.05 OrthoFinder output from all 47 species
Ceric.35G023300.1 RPL16, Ceric.35G023300 not classified & original description: pacid=50581973... 0.08 OrthoFinder output from all 47 species
Ceric.38G009100.1 RPL16, Ceric.38G009100 component *(uL16c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Cre06.g278224 No alias 60S ribosomal protein L16, mitochondrial OS=Prototheca... 0.02 OrthoFinder output from all 47 species
Gb_05912 RPL16 component mtRPL16 of large ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species
LOC_Os12g34128.1 LOC_Os12g34128 component mtRPL16 of large ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Mp1g22400.1 No alias 60S ribosomal protein L16, mitochondrial OS=Marchantia... 0.03 OrthoFinder output from all 47 species
Ore_g00369 RPL16 component *(uL16c) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Sam_g33347 No alias component *(uL16m) of large mitoribosomal-subunit... 0.16 OrthoFinder output from all 47 species
Solyc00g500032.1.1 RPL16, Solyc00g500032 50S ribosomal protein L16, chloroplastic OS=Atropa... 0.03 OrthoFinder output from all 47 species
Solyc00g500077.1.1 RPL16, Solyc00g500077 50S ribosomal protein L16, chloroplastic OS=Atropa... 0.03 OrthoFinder output from all 47 species
Solyc00g500245.1.1 Solyc00g500245 component mtRPL16 of large ribosomal subunit proteome.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 1 100
No external refs found!