Aop_g01241

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g01241

Target	Alias	Description	ECC score	Gene Family Method
AT1G69940	ATPPME1, PPME1	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
AT5G07430	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
Aev_g17897	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene21406.t1	Aspi01Gene21406	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene67011.t1	Aspi01Gene67011	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.37G019000.1	Ceric.37G019000	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g35272	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g51244	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01015290001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
LOC_Os05g44600.1	LOC_Os05g44600	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Nbi_g30255	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g06428	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g27386	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29702	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30829	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g07628	No alias	pecTin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	93	386

External Links

No external refs found!

Aop_g01241

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation