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  5. Aop_g02128

Aop_g02128 (ATSUG1, RPT6A)


Aliases : ATSUG1, RPT6A

Description : regulatory component *(RPT6) of 26S proteasome & original description: none


Gene families : OG0004338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g02128
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT5G19990 ATSUG1, RPT6A regulatory particle triple-A ATPase 6A 0.02 OrthoFinder output from all 47 species
Ceric.37G056200.1 ATSUG1, RPT6A,... regulatory component *(RPT6) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.28 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os06g39870.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Pir_g01586 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e014515_P001 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB_C 61 116
IPR041569 AAA_lid_3 331 373
IPR003959 ATPase_AAA_core 174 307
No external refs found!