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  5. Aop_g02177

Aop_g02177 (SnRK3.23, CIPK23,...)


Aliases : SnRK3.23, CIPK23, ATCIPK23, LKS1

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0000065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g02177
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00096970 CIPK1, SnRK3.16,... Protein modification.phosphorylation.CAMK kinase... 0.03 OrthoFinder output from all 47 species
AT1G48260 CIPK17, SnRK3.21 CBL-interacting protein kinase 17 0.03 OrthoFinder output from all 47 species
Als_g52274 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aspi01Gene05936.t1 CIPK3, SnRK3.17,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70302.t1 SNRK3.11, SOS2,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0222.g058772 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ceric.13G026300.1 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ceric.25G069200.1 KIN10, SNRK1.1,... EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021352.37 SnRK3.12, PKS6, CIPK9 CBL-interacting serine/threonine-protein kinase 9... 0.01 OrthoFinder output from all 47 species
Dac_g02180 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ehy_g14280 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
GSVIVT01021541001 SnRK3.23,... Protein modification.phosphorylation.CAMK kinase... 0.02 OrthoFinder output from all 47 species
LOC_Os05g11790.1 PKS18, CIPK20,... SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
LOC_Os05g45420.1 KIN10, SNRK1.1,... catalytic subunit alpha of SNF1-related SnRK1 protein... 0.03 OrthoFinder output from all 47 species
LOC_Os07g44290.1 CIPK1, SnRK3.16,... SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03810.2 CIPK3, SnRK3.17,... SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species
Nbi_g05324 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Pir_g34568 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020493 CIPK3, SnRK3.17 not classified & original description: CDS=305-535 0.02 OrthoFinder output from all 47 species
Solyc03g115700.3.1 KIN10, SNRK1.1,... catalytic subunit alpha of SNF1-related SnRK1 protein... 0.04 OrthoFinder output from all 47 species
Solyc06g082440.1.1 PKS5, SNRK3.22,... SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species
Tin_g12029 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e010838_P003 CIPK1, SnRK3.16,... SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 18 273
IPR004041 NAF_dom 317 375
No external refs found!