Description : subunit epsilon *(CCT5) of CCT chaperonin folding complex & original description: none
Gene families : OG0005131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005131_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g02559 | |
| Cluster | HCCA: Cluster_314 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00173980 | evm_27.TU.AmTr_v1... | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000571.47 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.03 | OrthoFinder output from all 47 species | |
| Cre03.g156750 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g05555 | No alias | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020856001 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_12826 | No alias | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.02 | OrthoFinder output from all 47 species | |
| Gb_40545 | No alias | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g36700.1 | LOC_Os06g36700 | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g19360 | No alias | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10435597g0010 | No alias | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g17510.1 | No alias | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18778 | No alias | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.04 | OrthoFinder output from all 47 species | |
| Smo158694 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g013990.3.1 | Solyc05g013990 | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011557_P001 | Zm00001e011557 | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032727_P001 | Zm00001e032727 | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000976 | transcription cis-regulatory region binding | IEP | HCCA |
| MF | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| MF | GO:0032422 | purine-rich negative regulatory element binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| CC | GO:0070531 | BRCA1-A complex | IEP | HCCA |
| CC | GO:0070552 | BRISC complex | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002423 | Cpn60/GroEL/TCP-1 | 40 | 531 |
| No external refs found! |
