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  5. Aop_g02770

Aop_g02770 (ATL2, TL2)


Aliases : ATL2, TL2

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g02770
Cluster HCCA: Cluster_282

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Ala_g00767 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.04G045600.1 Ceric.04G045600 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.25G030900.1 Ceric.25G030900 not classified & original description: pacid=50594363... 0.04 OrthoFinder output from all 47 species
Ceric.25G031000.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Gb_28932 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g49550.1 RHA3A, LOC_Os04g49550 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os06g16060.1 LOC_Os06g16060 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g34560.1 ATL43, LOC_Os06g34560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g34620.1 LOC_Os06g34620 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Len_g29871 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_124750g0010 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_19072g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_201864g0010 RHA3A RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_9989900g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Msp_g12499 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00299 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g22108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09567 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020113 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc04g009780.1.1 Solyc04g009780 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc05g008640.1.1 RHA2A, Solyc05g008640 RHA2 signal transducer of abscisic acid perception 0.02 OrthoFinder output from all 47 species
Spa_g01259 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00996 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e003426_P001 XERICO, Zm00001e003426 ubiquitin protein ligase (XERICO) 0.03 OrthoFinder output from all 47 species
Zm00001e015905_P001 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e019438_P001 Zm00001e019438 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e037108_P001 Zm00001e037108 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 103 146
No external refs found!