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  5. Lfl_g08921

Lfl_g08921 (MRP6, ATMRP6, ABCC8)


Aliases : MRP6, ATMRP6, ABCC8

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g08921
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Adi_g011290 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47598 ATMRP14, ABCC10, MRP14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07552 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09685.t1 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43482.t1 ATMRP12, MRP12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38039 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z046600.1 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.2 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.3 ATMRP8, MRP8, ABCC6 ABC transporter C family member 6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001024.2 AtABCC2, ABCC2,... ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001729.6 ABCC1, ATABCC1,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.190 ATABCC5, MRP5,... ABC transporter C family member 4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.4 ATMRP12, MRP12, ABCC11 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g12577 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09221 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12836 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g12212 ABCC3, ATMRP3, MRP3 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_211762g0010 MRP10, ATMRP10, ABCC14 ABC transporter C family member 14 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g22300 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29837 MRP9, ABCC9, ATMRP9 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08129 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g08067 No alias subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29278 No alias glutathione S-conjugate transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50406 No alias subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13670 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20006 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 106 371
IPR011527 ABC1_TM_dom 758 999
IPR003439 ABC_transporter-like_ATP-bd 467 601
IPR003439 ABC_transporter-like_ATP-bd 1088 1236
No external refs found!