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  5. Aop_g03162

Aop_g03162


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g03162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00191560 OTP82,... Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G16470 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g022147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30878 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27035 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g04037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19296 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g15083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46917 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g40720.1 LOC_Os01g40720 RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
LOC_Os01g60000.1 SLO1, LOC_Os01g60000 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Len_g04309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15249 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g21699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53555 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo72131 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Spa_g16206 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05979 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18985 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 178 224
IPR002885 Pentatricopeptide_repeat 75 122
IPR002885 Pentatricopeptide_repeat 280 327
IPR002885 Pentatricopeptide_repeat 50 73
IPR002885 Pentatricopeptide_repeat 356 381
IPR002885 Pentatricopeptide_repeat 152 174
IPR046848 E_motif 397 454
No external refs found!