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  5. Aop_g04942

Aop_g04942


Description : not classified & original description: none


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g04942

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00244640 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00244830 AATP1,... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G30250 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Adi_g054957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g42032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06413.t1 Aspi01Gene06413 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06430.t1 Aspi01Gene06430 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30040.t1 Aspi01Gene30040 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69592.t1 Aspi01Gene69592 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G071000.1 Ceric.19G071000 not classified & original description: pacid=50575763... 0.03 OrthoFinder output from all 47 species
Ceric.19G071300.1 Ceric.19G071300 not classified & original description: pacid=50576608... 0.05 OrthoFinder output from all 47 species
Dcu_g17234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g40140.1 LOC_Os01g40140 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g42030.1 BCS1, LOC_Os01g42030 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g02330.1 LOC_Os03g02330 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51130.1 BCS1, LOC_Os05g51130 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os10g37500.1 LOC_Os10g37500 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10285593g0010 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10435468g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_216982g0010 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g10169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04440 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo413949 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g082640.3.1 Solyc03g082640 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g055810.1.1 Solyc12g055810 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g00976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012527_P001 Zm00001e012527 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e013139_P001 Zm00001e013139 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e034224_P001 Zm00001e034224 AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e038158_P001 AATP1, Zm00001e038158 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004408 holocytochrome-c synthase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 245 383
IPR025753 AAA_N_dom 28 119
No external refs found!