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  5. Aop_g05074

Aop_g05074 (PUB14, ATPUB14)


Aliases : PUB14, ATPUB14

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05074

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00171260 PUB14, ATPUB14,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Adi_g025518 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07263 PUB13, ATPUB13 E3 ubiquitin ligase *(PUB15) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06664 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07408 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08869 PUB15 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03523 PUB14, ATPUB14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03799 ATPUB17, PUB17 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g13982 PUB13, ATPUB13 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03880 ATPUB17, PUB17 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g16654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene43159.t1 PUB14, ATPUB14,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44181.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000295 No alias not classified & original description: CDS=1-2304 0.02 OrthoFinder output from all 47 species
Azfi_s0070.g036784 PUB13, ATPUB13 not classified & original description: CDS=1-531 0.07 OrthoFinder output from all 47 species
Cba_g02580 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G010200.1 Ceric.10G010200 not classified & original description: pacid=50612946... 0.03 OrthoFinder output from all 47 species
Ceric.10G010300.1 ATPUB17, PUB17,... not classified & original description: pacid=50611933... 0.03 OrthoFinder output from all 47 species
Ceric.13G074400.1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.34G042900.1 PUB13, ATPUB13,... not classified & original description: pacid=50623547... 0.04 OrthoFinder output from all 47 species
Ceric.35G034600.1 PUB18, ATPUB18,... not classified & original description: pacid=50581001... 0.07 OrthoFinder output from all 47 species
Dac_g08066 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13651 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26575 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02331 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016225001 PUB14, ATPUB14 U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024985001 PUB13, ATPUB13 U-box domain-containing protein 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01026372001 PUB9, ATPUB9 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01032778001 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula 0.04 OrthoFinder output from all 47 species
LOC_Os08g04470.1 PUB8, B80, LOC_Os08g04470 U-box domain-containing protein 8 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Mp5g12560.1 PUB13, ATPUB13 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Msp_g16068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05165 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25238 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28901 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12544 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20244 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005097 No alias not classified & original description: CDS=1-2154 0.02 OrthoFinder output from all 47 species
Solyc02g072080.1.1 ATPUB17, PUB17,... U-box domain-containing protein 17 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc03g114160.1.1 Solyc03g114160 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Spa_g07392 PUB15 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08558 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18762 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24085 PUB14, ATPUB14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25117 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10003 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g16798 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014566_P002 PUB9, ATPUB9,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Zm00001e018578_P001 Zm00001e018578 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019429_P001 Zm00001e019429 U-box domain-containing protein 16 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e028839_P001 Zm00001e028839 U-box domain-containing protein 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 37 78
No external refs found!