1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g05330

Aop_g05330 (AGO1)


Aliases : AGO1

Description : regulatory protein *(AGO7) of transacting siRNA pathway & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269950 PNH, AGO10, ZLL,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00203090 AGO4, OCP11,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00114260 AGO2,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00049370 AGO1,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AMTR_s00083p00065730 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00169p00063850 AGO1,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AT2G27040 AGO4, OCP11 Argonaute family protein 0.04 OrthoFinder output from all 47 species
AT5G43810 PNH, AGO10, ZLL Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 OrthoFinder output from all 47 species
Ala_g34221 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06375 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60456 AGO7, ZIP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23299.t1 AGO7, ZIP,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0460.g072055 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Cba_g07250 PNH, AGO10, ZLL not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16426 AGO1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g77990 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.6 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Dac_g05113 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018054001 PNH, AGO10, ZLL Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
GSVIVT01025868001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
GSVIVT01031430001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
LOC_Os04g47870.1 AGO1, LOC_Os04g47870 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
LOC_Os06g39640.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
LOC_Os06g51310.2 AGO1, LOC_Os06g51310 RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species
Len_g12529 AGO7, ZIP not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_14457g0010 AGO9 Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_594g0010 PNH, AGO10, ZLL Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_71066g0010 AGO4, OCP11 Protein argonaute 4B OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_85246g0010 AGO9 Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp6g20400.1 AGO4, OCP11 siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Msp_g03218 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Msp_g14613 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21068 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Msp_g27281 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007503 AGO1 not classified & original description: CDS=68-2746 0.02 OrthoFinder output from all 47 species
Solyc03g111760.3.1 AGO4, OCP11,... Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc06g072300.4.1 AGO1, Solyc06g072300 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Solyc09g082830.4.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Tin_g14929 AGO9 siRNA-integraTing factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041452_P004 AGO1, Zm00001e041452 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR003100 PAZ_dom 461 573
IPR014811 ArgoL1 396 445
IPR003165 Piwi 743 1043
IPR032472 ArgoL2 585 631
IPR032474 Argonaute_N 260 386
No external refs found!