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  5. Aop_g05555

Aop_g05555


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05555

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00141060 PIF3, POC1,... External stimuli response.light.red/far red light.PIF... 0.05 OrthoFinder output from all 47 species
AT4G00050 UNE10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g048072 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055289 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109684 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07904 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ala_g08014 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39083 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49316 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20728 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35112.t2 SPT, Aspi01Gene35112 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35709.t2 Aspi01Gene35709 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026209 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g19851 SPT bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g25008 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26289 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g60405 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.11G032200.1 Ceric.11G032200 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.13G024600.1 PIL5, PIF1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.31G051300.1 LRL3, Ceric.31G051300 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G041700.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g11196 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007914001 PIF7 RNA biosynthesis.transcriptional activation.bHLH... 0.08 OrthoFinder output from all 47 species
LOC_Os03g58330.1 UNE12, LOC_Os03g58330 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os04g52770.1 PIL5, PIF1,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os07g05010.2 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40740.1 UNE10, LOC_Os10g40740 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g24250 SPT bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g14136 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11634 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19998 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33206 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ore_g43163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02825 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11202 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18085 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g50240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60433 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66268 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05994 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12116 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63739 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g090790.4.1 UNE10, Solyc01g090790 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc07g043580.4.1 PIL6, PIF5,... transcription factor (bHLH). PIF red/far-red light... 0.04 OrthoFinder output from all 47 species
Spa_g21312 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41478 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08817 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13248 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27626 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31873 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38881 SPT bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g39809 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002331_P003 UNE10, Zm00001e002331 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e005046_P003 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.04 OrthoFinder output from all 47 species
Zm00001e010540_P001 Zm00001e010540 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 409 455
No external refs found!