Aop_g06000


Description : not classified & original description: none


Gene families : OG0004539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004539_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06000

Target Alias Description ECC score Gene Family Method Actions
Adi_g025683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g02005 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ala_g07699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23312 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000254.94 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre06.g278096 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre16.g691351 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01007167001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01007444001 No alias Thioredoxin-like protein AAED1, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os03g51950.1 LOC_Os03g51950 no description available(sp|q9zuu2|pxl2c_arath : 87.0) 0.04 OrthoFinder output from all 47 species
LOC_Os03g51960.1 LOC_Os03g51960 no description available(sp|q9zuu2|pxl2c_arath : 85.9) 0.03 OrthoFinder output from all 47 species
Len_g32048 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g02735 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_106094g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_159242g0010 No alias no description available(sp|q9zuu2|pxl2c_arath : 85.9) 0.05 OrthoFinder output from all 47 species
Msp_g00430 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05951 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Tin_g00580 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e012107_P001 Zm00001e012107 no description available(sp|q9zuu2|pxl2c_arath : 88.6) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR032801 PXL2A/B/C 133 250
No external refs found!