Description : ribosome biogenesis factor *(CRASS) & original description: none
Gene families : OG0007938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007938_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g06536 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00224760 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT5G14910 | No alias | Heavy metal transport/detoxification superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g02821 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g13367 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060247 | No alias | ribosome biogenesis factor *(CRASS) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G033000.1 | Ceric.01G033000 | ribosome biogenesis factor *(CRASS) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g12212 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36209 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g11519 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04247 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05290 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_22864 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g27100.1 | LOC_Os05g27100 | ribosome biogenesis factor (CRASS) | 0.05 | OrthoFinder output from all 47 species | |
| Len_g14822 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g37391 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g04290.1 | No alias | ribosome biogenesis factor (CRASS) | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g05841 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02964 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c1_25290V3.1 | Pp3c1_25290 | Heavy metal transport/detoxification superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g00577 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13302 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13303 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g087150.3.1 | Solyc02g087150 | ribosome biogenesis factor (CRASS) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g10440 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e031534_P001 | Zm00001e031534 | ribosome biogenesis factor (CRASS) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| CC | GO:0005886 | plasma membrane | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
