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  5. Aop_g06806

Aop_g06806 (ABCB19, ATABCB19,...)


Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06806

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00102180 ABCB14,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT2G47000 ATPGP4, PGP4, ABCB4, MDR4 ATP binding cassette subfamily B4 0.03 OrthoFinder output from all 47 species
AT3G28360 PGP16 P-glycoprotein 16 0.04 OrthoFinder output from all 47 species
AT3G62150 PGP21 P-glycoprotein 21 0.03 OrthoFinder output from all 47 species
Adi_g010407 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07131 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07510 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18810 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28419 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g19030 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.03 OrthoFinder output from all 47 species
Ceric.1Z238200.1 Ceric.1Z238200 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G048300.1 Ceric.36G048300 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g03829 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47815 PGP11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007586001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_36503 No alias serine carboxypeptidase. subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g50100.1 PGP11, LOC_Os01g50100 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g46680.1 PGP2, LOC_Os02g46680 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os05g04610.1 ATPGP4, PGP4,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_10432922g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_141308g0010 ABCB19,... ABC transporter B family member 19 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_145496g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g21430.1 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Nbi_g02480 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37290 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08145 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04001 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035 PGP13 subfamily ABCB transporter & original description: CDS=555-4511 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017905 PGP11 not classified & original description: CDS=139-861 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018197 ABCB19,... subfamily ABCB transporter & original description: CDS=226-4089 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107 PGP2 subfamily ABCB transporter & original description: CDS=729-4781 0.02 OrthoFinder output from all 47 species
Smo231714 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc04g010310.4.1 PGP20, Solyc04g010310 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Spa_g19381 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041087_P002 Zm00001e041087 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 568 716
IPR011527 ABC1_TM_dom 230 500
IPR003439 ABC_transporter-like_ATP-bd 11 63
No external refs found!