Aop_g06833

Description : component *(eL14) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0002098 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002098_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g06833
Cluster	HCCA: Cluster_283

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00164470	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	OrthoFinder output from all 47 species
AMTR_s00067p00096180	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.14	OrthoFinder output from all 47 species
AT2G20450	No alias	Ribosomal protein L14	0.06	OrthoFinder output from all 47 species
AT4G27090	No alias	Ribosomal protein L14	0.08	OrthoFinder output from all 47 species
Adi_g022479	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aev_g27769	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ala_g00358	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g21502	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Azfi_s0046.g030206	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Azfi_s0063.g035376	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.11	OrthoFinder output from all 47 species
Cba_g09965	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Ceric.19G039800.1	Ceric.19G039800	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.27G036100.1	Ceric.27G036100	component *(eL14) of large ribosomal-subunit (LSU)...	0.13	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000194.50	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.13	OrthoFinder output from all 47 species
Cre17.g701200	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.16	OrthoFinder output from all 47 species
Dac_g24709	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Dac_g26392	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g04314	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.11	OrthoFinder output from all 47 species
Dde_g26829	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ehy_g00127	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ehy_g09487	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01012876001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.11	OrthoFinder output from all 47 species
GSVIVT01027844001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.12	OrthoFinder output from all 47 species
Gb_21078	No alias	component RPL14 of LSU proteome component	0.14	OrthoFinder output from all 47 species
LOC_Os02g40880.1	LOC_Os02g40880	component RPL14 of LSU proteome component	0.15	OrthoFinder output from all 47 species
Len_g32744	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Lfl_g29655	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
MA_10434733g0010	No alias	component RPL14 of LSU proteome component	0.07	OrthoFinder output from all 47 species
MA_37009g0010	No alias	component RPL14 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_99106g0010	No alias	component RPL14 of LSU proteome component	0.09	OrthoFinder output from all 47 species
Mp8g17070.1	No alias	component RPL14 of LSU proteome component	0.12	OrthoFinder output from all 47 species
Msp_g12121	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Nbi_g01610	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Nbi_g09265	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g09914	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pp3c15_5860V3.1	Pp3c15_5860	Ribosomal protein L14	0.1	OrthoFinder output from all 47 species
Pp3c24_20890V3.1	Pp3c24_20890	Ribosomal protein L14	0.09	OrthoFinder output from all 47 species
Pp3c8_25050V3.1	Pp3c8_25050	Ribosomal protein L14	0.02	OrthoFinder output from all 47 species
Ppi_g20907	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g11819	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.11	OrthoFinder output from all 47 species
Sam_g38083	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.13	OrthoFinder output from all 47 species
Smo403602	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.09	OrthoFinder output from all 47 species
Solyc06g008260.3.1	Solyc06g008260	component RPL14 of LSU proteome component	0.13	OrthoFinder output from all 47 species
Solyc06g083820.3.1	Solyc06g083820	component RPL14 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Solyc09g066430.3.1	Solyc09g066430	component RPL14 of LSU proteome component	0.14	OrthoFinder output from all 47 species
Spa_g10974	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.19	OrthoFinder output from all 47 species
Spa_g16062	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.14	OrthoFinder output from all 47 species
Spa_g16063	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.13	OrthoFinder output from all 47 species
Spa_g23759	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Spa_g28088	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Tin_g13393	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Zm00001e010296_P001	Zm00001e010296	component RPL14 of LSU proteome component	0.14	OrthoFinder output from all 47 species
Zm00001e034932_P003	Zm00001e034932	component RPL14 of LSU proteome component	0.14	OrthoFinder output from all 47 species
Zm00001e041233_P002	Zm00001e041233	component RPL14 of LSU proteome component	0.13	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	HCCA
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0046112	nucleobase biosynthetic process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002784	Ribosomal_L14e_dom	45	117

External Links

No external refs found!

Aop_g06833

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation