1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g07682

Aop_g07682 (PUB13, ATPUB13)


Aliases : PUB13, ATPUB13

Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g07682

Target Alias Description ECC score Gene Family Method Actions
AT3G46510 PUB13, ATPUB13 plant U-box 13 0.03 OrthoFinder output from all 47 species
Adi_g026489 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05890 PUB13, ATPUB13 E3 ubiquitin ligase *(PUB15) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04410 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06664 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44181.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0060.g034769 PUB13, ATPUB13 E3 ubiquitin ligase & original description: CDS=1-2214 0.03 OrthoFinder output from all 47 species
Azfi_s2565.g112179 No alias not classified & original description: CDS=1-438 0.03 OrthoFinder output from all 47 species
Ceric.08G025000.1 Ceric.08G025000 not classified & original description: pacid=50638405... 0.05 OrthoFinder output from all 47 species
GSVIVT01020229001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os02g49950.1 LOC_Os02g49950 E3 ubiquitin ligase (PUB) 0.06 OrthoFinder output from all 47 species
Len_g16436 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_9917294g0010 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003607 ATPUB17, PUB17 not classified & original description: CDS=1-2595 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0159.g023812 PUB13, ATPUB13 E3 ubiquitin ligase & original description: CDS=1-1965 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 294 364
IPR000225 Armadillo 451 489
IPR000225 Armadillo 492 530
IPR000225 Armadillo 409 448
No external refs found!