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  5. Aop_g07700

Aop_g07700


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g07700

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00218280 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT1G03510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G08210 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057031 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30861 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43183.t1 Aspi01Gene43183 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64480.t1 Aspi01Gene64480 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009229 No alias not classified & original description: CDS=1-2601 0.05 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.03 OrthoFinder output from all 47 species
Azfi_s0058.g034473 No alias not classified & original description: CDS=1-2799 0.05 OrthoFinder output from all 47 species
Azfi_s0117.g046522 No alias not classified & original description: CDS=125-2725 0.04 OrthoFinder output from all 47 species
Azfi_s0373.g067166 No alias not classified & original description: CDS=1-2166 0.04 OrthoFinder output from all 47 species
Azfi_s0471.g072918 No alias not classified & original description: CDS=1-3447 0.04 OrthoFinder output from all 47 species
Cba_g09310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G044500.1 Ceric.02G044500 not classified & original description: pacid=50585717... 0.03 OrthoFinder output from all 47 species
Ceric.10G001600.1 EMB2758, Ceric.10G001600 not classified & original description: pacid=50613605... 0.03 OrthoFinder output from all 47 species
Ceric.12G028500.1 CRR22, Ceric.12G028500 not classified & original description: pacid=50602410... 0.03 OrthoFinder output from all 47 species
Ceric.27G064300.1 Ceric.27G064300 not classified & original description: pacid=50606133... 0.03 OrthoFinder output from all 47 species
Ceric.35G007000.1 Ceric.35G007000 not classified & original description: pacid=50581130... 0.03 OrthoFinder output from all 47 species
Dac_g09323 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12101 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
GSVIVT01027504001 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.02 OrthoFinder output from all 47 species
LOC_Os05g36350.1 MEF21, LOC_Os05g36350 RNA editing factor (MEF21) 0.02 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g47370.1 LOC_Os07g47370 Pentatricopeptide repeat-containing protein At4g32430,... 0.02 OrthoFinder output from all 47 species
LOC_Os08g39130.1 LOC_Os08g39130 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.02 OrthoFinder output from all 47 species
Len_g54485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32914 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_23144g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Pnu_g02677 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03469 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26686 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008229 No alias not classified & original description: CDS=1-3597 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011031 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018665 No alias not classified & original description: CDS=8-2563 0.03 OrthoFinder output from all 47 species
Sam_g03859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo101239 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Spa_g07598 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38609 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20369 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26741 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44704 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0017062 respiratory chain complex III assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0034551 mitochondrial respiratory chain complex III assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 409 456
IPR002885 Pentatricopeptide_repeat 510 558
IPR002885 Pentatricopeptide_repeat 211 254
IPR002885 Pentatricopeptide_repeat 108 158
IPR002885 Pentatricopeptide_repeat 312 356
IPR002885 Pentatricopeptide_repeat 185 208
IPR002885 Pentatricopeptide_repeat 286 309
IPR002885 Pentatricopeptide_repeat 80 107
No external refs found!