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  5. Aop_g08132

Aop_g08132


Description : snoRNP rRNA methylation complex assembly factor *(NUFIP) & original description: none


Gene families : OG0003682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08132

Target Alias Description ECC score Gene Family Method Actions
Adi_g082531 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.04 OrthoFinder output from all 47 species
Aev_g07950 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
Ala_g22823 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Als_g63113 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Aob_g11786 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Cba_g38684 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Ceric.10G029400.1 Ceric.10G029400 snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Ceric.30G030300.1 Ceric.30G030300 not classified & original description: pacid=50608069... 0.03 OrthoFinder output from all 47 species
Dcu_g50146 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
GSVIVT01027215001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder output from all 47 species
Gb_31525 No alias NUFIP snoRNP rRNA methylation complex assembly factor 0.03 OrthoFinder output from all 47 species
MA_30455g0010 No alias NUFIP snoRNP rRNA methylation complex assembly factor 0.02 OrthoFinder output from all 47 species
Pir_g07400 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Pnu_g23882 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Pp3c27_4140V3.1 Pp3c27_4140 No annotation 0.01 OrthoFinder output from all 47 species
Sam_g16776 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
Solyc01g096920.3.1 Solyc01g096920 NUFIP snoRNP rRNA methylation complex assembly factor 0.04 OrthoFinder output from all 47 species
Spa_g15180 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Zm00001e019484_P003 Zm00001e019484 NUFIP snoRNP rRNA methylation complex assembly factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019496 NUFIP1_cons_dom 394 432
No external refs found!