Aop_g08703

Description : component *(uL14) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001634_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g08703

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00206470	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Ala_g22432	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aob_g05420	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Azfi_s0018.g014977	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0509.g074710	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.06G080100.1	Ceric.06G080100	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.14G092400.1	Ceric.14G092400	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cre04.g211800	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dac_g19614	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g12677	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
GSVIVT01028407001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Gb_21541	No alias	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os02g56960.1	LOC_Os02g56960	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os03g04590.1	LOC_Os03g04590	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os10g32920.1	LOC_Os10g32920	component RPL23 of LSU proteome component	0.02	OrthoFinder output from all 47 species
MA_950121g0010	No alias	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Nbi_g37801	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g11546	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g47118	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Solyc06g008170.3.1	Solyc06g008170	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Solyc06g083780.3.1	Solyc06g083780	component RPL23 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Solyc09g072865.1.1	Solyc09g072865	component RPL23 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Spa_g08149	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g17111	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Spa_g52019	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g03689	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Zm00001e000323_P001	Zm00001e000323	component RPL23 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e023614_P001	Zm00001e023614	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000218	Ribosomal_L14P	46	164

External Links

No external refs found!

Aop_g08703

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation