Aliases : RUB1, ATRUB1, NEDD8
Description : RUB ubiquitin-fold protein & original description: none
Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G02890 | UBQ14 | Ubiquitin family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G05050 | UBQ11 | ubiquitin 11 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g129218 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g10329 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G025200.1 | UBQ14, Ceric.31G025200 | UBQ ubiquitin-fold protein & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033876001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02100 | RUB1, ATRUB1, NEDD8 | RUB ubiquitin-fold protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05310 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030436_P001 | RUB1, ATRUB1,... | ubiquitin-fold protein (UBQ). ubiquitin-fold protein (RUB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004659 | prenyltransferase activity | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006405 | RNA export from nucleus | IEP | HCCA |
| BP | GO:0006406 | mRNA export from nucleus | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008318 | protein prenyltransferase activity | IEP | HCCA |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| BP | GO:0018342 | protein prenylation | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043248 | proteasome assembly | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0050657 | nucleic acid transport | IEP | HCCA |
| BP | GO:0050658 | RNA transport | IEP | HCCA |
| BP | GO:0051028 | mRNA transport | IEP | HCCA |
| BP | GO:0051168 | nuclear export | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051236 | establishment of RNA localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0097354 | prenylation | IEP | HCCA |
| No external refs found! |
