Aop_g09954 (AGL2, SEP1)

Aliases : AGL2, SEP1

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g09954
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AT1G24260	AGL9, SEP3	K-box region and MADS-box transcription factor family protein	0.03	OrthoFinder output from all 47 species
AT2G45650	AGL6	AGAMOUS-like 6	0.03	OrthoFinder output from all 47 species
AT3G02310	AGL4, SEP2	K-box region and MADS-box transcription factor family protein	0.02	OrthoFinder output from all 47 species
Aop_g32548	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g69646	AGL16	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01035477001	AGL30	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01036551001	AGL2, SEP1	RNA biosynthesis.transcriptional activation.MADS box...	0.01	OrthoFinder output from all 47 species
LOC_Os03g03070.1	GL19, AGL19,...	MADS-box transcription factor 50 OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species
LOC_Os03g03100.1	AGL14, LOC_Os03g03100	transcription factor (MADS/AGL)	0.01	OrthoFinder output from all 47 species
LOC_Os10g39130.1	GL19, AGL19,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os11g43740.1	AGL65, LOC_Os11g43740	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Len_g23837	AGL6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g24008	STK, AGL11	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_8748850g0010	AGL24	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Pir_g21582	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g48804	AGL8, FUL	regulatory protein *(AP1/CAL/FUL) of floral meristem...	0.02	OrthoFinder output from all 47 species
Pnu_g12852	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g04968	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g09107	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g33045	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g61246	AGL21	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002217	AGL15	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003429	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g18903	No alias	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g27238	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g091550.2.1	AGL21, Solyc02g091550	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc06g069430.3.1	AGL8, FUL, Solyc06g069430	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Spa_g45506	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e003670_P002	AGL79, Zm00001e003670	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	98	145
IPR002487	TF_Kbox	171	258

External Links

No external refs found!

Aop_g09954 (AGL2, SEP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation