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  5. Aop_g10592

Aop_g10592


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g10592

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AT1G69940 ATPPME1, PPME1 Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07410 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G07420 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G18990 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g10289 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16363 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g18114 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20368 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37035 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38864 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40489 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24708 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26631 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11060 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12101 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12395 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04456 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30459 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58922 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16842.t2 Aspi01Gene16842 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008437 No alias pectin methylesterase & original description: CDS=79-1257 0.06 OrthoFinder output from all 47 species
Azfi_s0033.g024992 No alias pectin methylesterase & original description: CDS=226-1431 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033955 No alias pectin methylesterase & original description: CDS=387-1493 0.03 OrthoFinder output from all 47 species
Azfi_s0648.g080900 No alias pectin methylesterase & original description: CDS=62-1303 0.03 OrthoFinder output from all 47 species
Cba_g05738 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.05G031400.1 Ceric.05G031400 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.10G076400.1 Ceric.10G076400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G007100.1 Ceric.11G007100 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G007600.1 Ceric.11G007600 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G037000.1 Ceric.13G037000 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G037800.1 Ceric.13G037800 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z171200.1 Ceric.1Z171200 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G056100.1 VGDH1, Ceric.21G056100 not classified & original description: pacid=50603924... 0.03 OrthoFinder output from all 47 species
Ceric.24G024700.1 Ceric.24G024700 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07534 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11068 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11820 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dac_g17627 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20667 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11350 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42904 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47291 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48343 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03343 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09802 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12393 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g15499 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023786001 ATPE11, PE11 Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Gb_23209 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_41519 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Len_g02282 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07516 No alias pectin methylesterase & original description: none 0.09 OrthoFinder output from all 47 species
Len_g07605 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12450 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15122 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_14449g0010 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Mp2g01420.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp4g01190.1 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Msp_g04640 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g06289 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10586 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03614 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27443 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26065 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39490 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31507 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59766 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61465 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004950 No alias pectin methylesterase & original description: CDS=716-1846 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005949 No alias pectin methylesterase & original description: CDS=175-1425 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091 No alias pectin methylesterase & original description: CDS=1-882 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122 No alias not classified & original description: CDS=269-877 0.02 OrthoFinder output from all 47 species
Sam_g11685 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g37525 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc01g109740.3.1 ATPE11, PE11,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc05g053680.1.1 Solyc05g053680 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc07g043240.4.1 Solyc07g043240 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Spa_g07165 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10100 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31270 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50750 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002891_P001 Zm00001e002891 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e007306_P001 Zm00001e007306 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e029074_P001 Zm00001e029074 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e035522_P001 QRT1, Zm00001e035522 pectin methylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 128 414
No external refs found!