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  5. Aop_g10626

Aop_g10626 (EMB3011)


Aliases : EMB3011

Description : RNA helicase *(Prp16) & original description: none


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g10626

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000984.27 ESP3, EMB2733 Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.01 OrthoFinder output from all 47 species
Cre03.g182950 No alias RNA processing.RNA splicing.spliceosome... 0.01 OrthoFinder output from all 47 species
Cre12.g520150 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.01 OrthoFinder output from all 47 species
Ehy_g22606 EMB3011 RNA helicase *(Prp16) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009152 No alias not classified & original description: CDS=1-849 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009162 No alias not classified & original description: CDS=1-849 0.03 OrthoFinder output from all 47 species
Sam_g08957 No alias RNA helicase *(Prp2) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006820 monoatomic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 331 484
IPR001650 Helicase_C 532 658
IPR011709 DEAD-box_helicase_OB_fold 869 943
IPR007502 Helicase-assoc_dom 722 807
No external refs found!