Aliases : DRT111
Description : pre-mRNA splicing factor *(SFPS/DRT111) & original description: none
Gene families : OG0007273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007273_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g10966 | |
| Cluster | HCCA: Cluster_329 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ceric.11G091900.1 | DRT111, Ceric.11G091900 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000792.17 | DRT111 | RNA processing.RNA splicing.U2-type-intron-specific... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g34190.1 | DRT111, LOC_Os01g34190 | pre-mRNA splicing factor (SPF45/RBM17) | 0.01 | OrthoFinder output from all 47 species | |
| Len_g09639 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10943 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07316 | No alias | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| No external refs found! |
