Aop_g11001


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00023600 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g50270... 0.03 OrthoFinder output from all 47 species
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g23983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30058 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g38952 OTP81 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14171 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18026 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27801 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g31130 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44998 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 545 593
IPR002885 Pentatricopeptide_repeat 142 186
IPR002885 Pentatricopeptide_repeat 647 693
IPR002885 Pentatricopeptide_repeat 447 493
IPR002885 Pentatricopeptide_repeat 343 392
IPR002885 Pentatricopeptide_repeat 245 267
IPR002885 Pentatricopeptide_repeat 419 442
IPR002885 Pentatricopeptide_repeat 621 643
IPR002885 Pentatricopeptide_repeat 217 244
No external refs found!