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  5. Aop_g11141

Aop_g11141 (LBD4)


Aliases : LBD4

Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11141
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00153120 LBD1,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.03 OrthoFinder output from all 47 species
Als_g00489 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03525 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10153 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68836 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0225.g058902 LBD4 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g33500 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G060200.1 LBD15, ASL11,... AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g06562 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06666 LOB AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26972 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g07510.1 LBD18, LOC_Os10g07510 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Nbi_g00488 LOB AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38666 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40723 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42913 LBD27, SCP AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43400 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60181 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g082310.3.1 LBD12, ASL5,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc06g082430.2.1 LBD15, ASL11,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Tin_g03811 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12549 LBD4 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 69 166
No external refs found!