Description : not classified & original description: none
Gene families : OG0003467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003467_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g11427 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00213680 | evm_27.TU.AmTr_v1... | Reticulon-like protein B18 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT5G58000 | No alias | Reticulon family protein | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15679 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g14465 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05841 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g01665 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g19990.1 | LOC_Os02g19990 | Reticulon-like protein B17 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_18411g0010 | No alias | Reticulon-like protein B21 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_22853g0010 | No alias | Reticulon-like protein B21 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g14200.1 | No alias | Reticulon-like protein B21 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g08988 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g18960 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g34399 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007280 | No alias | not classified & original description: CDS=1-1662 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g010120.2.1 | Solyc12g010120 | Reticulon-like protein B21 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g02418 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003388 | Reticulon | 372 | 521 |
| No external refs found! |
