Aop_g11539


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11539

Target Alias Description ECC score Gene Family Method Actions
Ala_g16632 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g10785 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35442 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g36350.1 MEF21, LOC_Os05g36350 RNA editing factor (MEF21) 0.05 OrthoFinder output from all 47 species
Lfl_g22764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g12725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g62195 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo136134 EMB2261 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Smo171135 OTP84 Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 433 481
IPR002885 Pentatricopeptide_repeat 232 278
IPR002885 Pentatricopeptide_repeat 130 177
IPR002885 Pentatricopeptide_repeat 335 360
IPR002885 Pentatricopeptide_repeat 75 97
IPR002885 Pentatricopeptide_repeat 409 430
IPR002885 Pentatricopeptide_repeat 206 230
IPR002885 Pentatricopeptide_repeat 102 126
No external refs found!