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  5. Lfl_g09839

Lfl_g09839


Description : not classified & original description: none


Gene families : OG0005941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g09839
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Aev_g02985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g02288 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g19193 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g00497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G064900.1 Ceric.30G064900 not classified & original description: pacid=50608833... 0.04 OrthoFinder output from all 47 species
Dac_g04077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g49534 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01010187001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os02g58310.2 LOC_Os02g58310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g22341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428219g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10429473g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g20390.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g40030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000687 No alias not classified & original description: CDS=312-986 0.04 OrthoFinder output from all 47 species
Solyc04g009370.4.1 Solyc04g009370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g07180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016279_P001 Zm00001e016279 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021420 DUF3067 110 214
No external refs found!