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  5. Aop_g12516

Aop_g12516


Description : phosphoglycerate mutase & original description: none


Gene families : OG0001562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12516
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00199710 evm_27.TU.AmTr_v1... Cellular respiration.glycolysis.plastidial... 0.03 OrthoFinder output from all 47 species
Als_g05965 No alias phosphoglycerate mutase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008997001 No alias Cellular respiration.glycolysis.plastidial... 0.04 OrthoFinder output from all 47 species
Nbi_g02775 No alias phosphoglycerate mutase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c15_8070V3.1 PGM, Pp3c15_8070 phosphoglycerate/bisphosphoglycerate mutase 0.01 OrthoFinder output from all 47 species
Ppi_g13604 PGM phosphoglycerate mutase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18545 No alias phosphoglycerate mutase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007109 No alias not classified & original description: CDS=1-963 0.02 OrthoFinder output from all 47 species
Solyc04g054820.3.1 Solyc04g054820 phosphoglycerate mutase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 58 112
IPR013078 His_Pase_superF_clade-1 129 251
No external refs found!