1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g12889

Aop_g12889


Description : GRAS-type transcription factor & original description: none


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12889

Target Alias Description ECC score Gene Family Method Actions
Adi_g054835 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36937 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38338 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26224 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14022 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21717 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g52700 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05456.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24624.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32542.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72628.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g42543 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04050 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g15292 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18748 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22571 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33030 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10688 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47799 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016523001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
GSVIVT01024932001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
GSVIVT01024935001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.05 OrthoFinder output from all 47 species
LOC_Os03g40080.1 LOC_Os03g40080 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
LOC_Os11g47870.1 LOC_Os11g47870 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
LOC_Os11g47890.1 LOC_Os11g47890 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
LOC_Os11g47900.1 LOC_Os11g47900 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Len_g32687 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g11143 No alias GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47996 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08951 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21507 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06907 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62353 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009546 No alias GRAS-type transcription factor & original description: CDS=1-2640 0.03 OrthoFinder output from all 47 species
Sam_g40343 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc05g053090.2.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Solyc09g010920.1.1 Solyc09g010920 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Spa_g16511 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g17280 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48682 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52612 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53582 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56681 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g46262 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006195_P001 ATGRAS2, SCL14,... transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Zm00001e020921_P001 Zm00001e020921 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Zm00001e020937_P001 Zm00001e020937 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Zm00001e020943_P001 Zm00001e020943 transcription factor (GRAS) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 458 830
No external refs found!