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  5. Aop_g12896

Aop_g12896


Description : fucosyl transferase (FRB) involved in pectin-dependent cell adhesion & original description: none


Gene families : OG0001382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12896
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AT5G01100 No alias O-fucosyltransferase family protein 0.04 OrthoFinder output from all 47 species
Aev_g06079 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ala_g20120 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Als_g45254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10444.t3 Aspi01Gene10444 fucosyl transferase (FRB) involved in pectin-dependent... 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g007614 No alias not classified & original description: CDS=1-2379 0.01 OrthoFinder output from all 47 species
Ceric.19G030800.1 Ceric.19G030800 fucosyl transferase (FRB) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Ceric.21G025600.1 Ceric.21G025600 fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ceric.26G019700.1 Ceric.26G019700 fucosyl transferase (FRB) involved in pectin-dependent... 0.01 OrthoFinder output from all 47 species
Ceric.31G048900.1 Ceric.31G048900 fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Dcu_g04063 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Dcu_g05669 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Ehy_g03822 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.05 OrthoFinder output from all 47 species
Ehy_g13034 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
GSVIVT01015089001 No alias O-fucosyltransferase 35 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01016387001 No alias O-fucosyltransferase 19 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Mp1g10780.1 No alias rhamnosyltransferase 0.02 OrthoFinder output from all 47 species
Mp2g05730.1 No alias O-fucosyltransferase 19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g03117 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Nbi_g21981 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g33775 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.01 OrthoFinder output from all 47 species
Pir_g17124 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Pnu_g18995 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ppi_g18971 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020561 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Solyc03g096370.3.1 Solyc03g096370 O-fucosyltransferase 19 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc07g041750.3.1 Solyc07g041750 O-fucosyltransferase 35 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc09g011860.4.1 Solyc09g011860 O-fucosyltransferase 19 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g05385 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Tin_g07635 No alias fucosyl transferase (FRB) involved in pecTin-dependent... 0.08 OrthoFinder output from all 47 species
Zm00001e028741_P001 Zm00001e028741 O-fucosyltransferase 19 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 306 619
No external refs found!