Aop_g13105


Description : ribosome docking factor *(MDM38) & original description: none


Gene families : OG0002125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002125_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00145760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aob_g18832 No alias ribosome docking factor *(MDM38) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G129300.1 Ceric.01G129300 ribosome docking factor *(MDM38) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G078200.1 Ceric.23G078200 ribosome docking factor *(MDM38) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g03092 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27296 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Lfl_g02254 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12234 No alias ribosome docking factor *(MDM38) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07911 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007694_P001 Zm00001e007694 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043022 ribosome binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR033122 LETM1-like_RBD 353 586
No external refs found!