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  5. Aop_g13224

Aop_g13224


Description : not classified & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13224

Target Alias Description ECC score Gene Family Method Actions
AT1G01370 HTR12, CENH3 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G75600 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10400 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g32083 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23279 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17120.t1 Aspi01Gene17120 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04505 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013329 No alias histone *(H3) & original description: CDS=1-369 0.02 OrthoFinder output from all 47 species
Zm00001e008160_P001 Zm00001e008160 histone (H3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 62 101
No external refs found!