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  5. Aop_g13379

Aop_g13379


Description : substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin ligase complex & original description: none


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13379
Cluster HCCA: Cluster_322

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00237490 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
AT5G67385 No alias Phototropic-responsive NPH3 family protein 0.05 OrthoFinder output from all 47 species
Adi_g113238 RPT3, NPH3, JK218 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g113239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22731 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aop_g14404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042710 No alias not classified & original description: CDS=300-2192 0.03 OrthoFinder output from all 47 species
Ceric.33G050400.1 Ceric.33G050400 not classified & original description: pacid=50606641... 0.04 OrthoFinder output from all 47 species
Ceric.37G013500.1 Ceric.37G013500 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Dac_g10415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000146001 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024541001 RPT2 Root phototropism protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g10880.1 LOC_Os03g10880 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g18310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g07060.1 No alias BTB/POZ domain-containing protein At5g48800... 0.03 OrthoFinder output from all 47 species
Ore_g22180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 235 509
IPR000210 BTB/POZ_dom 42 131
No external refs found!