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  5. Aop_g13434

Aop_g13434


Description : component *(eIF2A) of initiator tRNA carrier complex & original description: none


Gene families : OG0005238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13434

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00033770 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Als_g07528 No alias component *(eIF2A) of initiator tRNA carrier complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01038139001 No alias Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
LOC_Os02g39350.1 LOC_Os02g39350 component eIF2A of initiator tRNA carrier complex 0.02 OrthoFinder output from all 47 species
Nbi_g11217 No alias component *(eIF2A) of initiator tRNA carrier complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007694 No alias component *(eIF2A) of initiator tRNA carrier complex &... 0.02 OrthoFinder output from all 47 species
Sam_g10154 No alias component *(eIF2A) of initiator tRNA carrier complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e015054_P002 Zm00001e015054 component eIF2A of initiator tRNA carrier complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
CC GO:0030289 protein phosphatase 4 complex IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013979 TIF_beta_prop-like 210 403
No external refs found!