Aliases : HAF01, HAC13, TAF1, HAF1, GTD1
Description : component *(HAF/TAF1) of SAGA transcription co-activator complex & original description: none
Gene families : OG0003088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00132750 | HAF01, HAC13,... | Protein modification.phosphorylation.atypical kinase... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G32750 | HAF01, HAC13,... | HAC13 protein (HAC13) | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g086241 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g16440 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g25268 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g23531 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g30416 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g24847 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene49969.t1 | TAF1B, TAF1,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene49971.t1 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene63823.t1 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g011150 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g11487 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.20G008000.1 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020903.20 | HAF01, HAC13,... | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Cre03.g175851 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cre10.g425501 | HAF01, HAC13,... | Transcription initiation factor TFIID subunit 1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g06992 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03217 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g23638 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020528001 | HAF01, HAC13,... | Protein modification.phosphorylation.atypical kinase... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_10677 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g43790.1 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g06767 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g04821 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g40406 | TAF1B, TAF1, HAF2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g32049 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g37859 | No alias | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Smo409957 | HAF01, HAC13,... | Protein modification.phosphorylation.atypical kinase... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g006820.4.1 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g11474 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e037464_P001 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006302 | double-strand break repair | IEP | HCCA |
| BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| No external refs found! |
