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  5. Aop_g13618

Aop_g13618 (ARF6)


Aliases : ARF6

Description : ARF-type transcription factor & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13618

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00211p00025860 MP, IAA24, ARF5,... RNA biosynthesis.transcriptional activation.B3... 0.01 OrthoFinder output from all 47 species
Aob_g07961 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24155 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene66818.t1 HSS, ARF1-BP,... ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0013.g013413 ARF10 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g09882 ARF1 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g22110 ARF6 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03681 TIR5, MSG1,... ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15247 HSS, ARF1-BP, ARF2, ORE14 transcription factor (ARF) 0.06 OrthoFinder output from all 47 species
Len_g20412 ARF6 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g14944 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g12750.1 ARF6 transcription factor (ARF) 0.01 OrthoFinder output from all 47 species
Msp_g31549 ARF16 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30357 ARF16 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018261 TIR5, MSG1,... not classified & original description: CDS=484-2670 0.01 OrthoFinder output from all 47 species
Sam_g19673 No alias ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39105 No alias ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010525 ARF_dom 262 345
IPR003340 B3_DNA-bd 136 237
IPR033389 AUX/IAA_dom 1105 1145
No external refs found!