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  5. Aop_g13898

Aop_g13898


Description : UMF23-type solute transporter & original description: none


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13898

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00250920 evm_27.TU.AmTr_v1... Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00013p00060560 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00061170 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G16660 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g19081 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09437 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21549.t1 Aspi01Gene21549 UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35186 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27964 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25303 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05864 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008084001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01024607001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033076001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g61010.1 LOC_Os01g61010 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
LOC_Os03g47810.1 LOC_Os03g47810 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
LOC_Os05g39800.1 LOC_Os05g39800 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Lfl_g03352 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31167 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_120504g0010 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
MA_256013g0010 NFD4 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
MA_40195g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_49528g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g06660.1 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Mp6g03460.1 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Msp_g02835 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32768 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001188 No alias UMF23-type solute transporter & original description: CDS=1-4125 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012628 No alias UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Smo166743 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g111350.3.1 Solyc01g111350 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 26 274
No external refs found!