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  5. Aop_g14298

Aop_g14298


Description : regulatory protein *(CMU) of microtubule-dependent CSC insertion & original description: none


Gene families : OG0000703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000703_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g14298

Target Alias Description ECC score Gene Family Method Actions
AT3G27960 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g03375 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Aev_g37891 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Ala_g23645 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.09 OrthoFinder output from all 47 species
Als_g07149 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.08 OrthoFinder output from all 47 species
Als_g07255 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g23493 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Aop_g08747 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Aop_g13686 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.06 OrthoFinder output from all 47 species
Aspi01Gene10392.t1 Aspi01Gene10392 regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Aspi01Gene36424.t1 Aspi01Gene36424 regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009732 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Dac_g03822 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Dac_g05126 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Dac_g17797 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
GSVIVT01032474001 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os02g47880.1 LOC_Os02g47880 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
Lfl_g27290 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.06 OrthoFinder output from all 47 species
MA_23850g0010 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.03 OrthoFinder output from all 47 species
MA_760658g0010 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
Nbi_g01231 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008050 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Sam_g19440 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Solyc02g086840.3.1 Solyc02g086840 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
Spa_g04349 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Tin_g02078 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Tin_g11108 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Zm00001e025391_P001 Zm00001e025391 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 224 249
IPR019734 TPR_repeat 394 420
No external refs found!