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  5. Aop_g14476

Aop_g14476


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g14476

Target Alias Description ECC score Gene Family Method Actions
Aev_g42381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17504 OTP81 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17512 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g22076 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g30721 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g54319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25536 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68092 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68120 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69963 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G035800.1 Ceric.05G035800 not classified & original description: pacid=50577834... 0.04 OrthoFinder output from all 47 species
Ceric.10G007000.1 Ceric.10G007000 not classified & original description: pacid=50613077... 0.02 OrthoFinder output from all 47 species
LOC_Os11g17530.2 LOC_Os11g17530 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
Lfl_g07378 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02333 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g30593 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30631 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002764 No alias not classified & original description: CDS=1-2754 0.02 OrthoFinder output from all 47 species
Sam_g33599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g061340.1.1 OTP84, Solyc09g061340 Pentatricopeptide repeat-containing protein At2g13600... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 613 637
IPR002885 Pentatricopeptide_repeat 411 434
IPR002885 Pentatricopeptide_repeat 137 164
IPR002885 Pentatricopeptide_repeat 210 231
IPR032867 DYW_dom 1067 1137
IPR002885 Pentatricopeptide_repeat 845 887
IPR002885 Pentatricopeptide_repeat 437 483
IPR002885 Pentatricopeptide_repeat 638 686
IPR002885 Pentatricopeptide_repeat 335 383
IPR002885 Pentatricopeptide_repeat 739 787
IPR002885 Pentatricopeptide_repeat 537 585
No external refs found!